PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G07200.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 410aa MW: 46666.8 Da PI: 6.7534

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G07200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.3	5.6e-20	96	194	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcp 80 +W +v++L+ a+ +++e++ + ++k++W+ vs++m ergf +sp+qC++k+++lnkryk+++e+ +++t ++++++ ONIVA07G07200.1 96 KWISGMVKLLVSAVAYIDEDVDMDYgtgsaarrkhamlKRKGKWRLVSAAMTERGFPVSPQQCEDKFNDLNKRYKRMTEILGRGTaCQVVEHPE 189 799**********8888877542334467778888899*****************************************95488887777 PP trihelix 81 yfdql 85 +++ + ONIVA07G07200.1 190 LLEGM 194 76655 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MEGNLPPRGA LVHGHGGGVG AFDLEATMQP PPPFHFAQDP HLHHHQGMVP VRGNPMLDLG 60 NVVKTSPSDE EDVDDGHHHG GGGGSGKEAS QWHRVKWISG MVKLLVSAVA YIDEDVDMDY 120 GTGSAARRKH AMLKRKGKWR LVSAAMTERG FPVSPQQCED KFNDLNKRYK RMTEILGRGT 180 ACQVVEHPEL LEGMRLSGKL KEEARKHLNS KHLHYEEMCS YHNRNKMCLF DDPALQKSLR 240 LALRSGEEHA KKNPFGYDDE DFSDDDDEDE EFDDLEVSAE DHHHGIHGAK RLKHDQEETH 300 FGSNLSEVAV IDMNKMLSEG SGGPTAEKSP STPGMRDIRL EKRRLKIKAQ MLKIEQKHFK 360 WLRFSKEKDR ELEKMRLENE KMKLENERLE LELKLKEIEM GIKPKKIFSD

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MEGNLPPRGA LVHGHGGGVG AFDLEATMQP PPPFHFAQDP HLHHHQGMVP VRGNPMLDLG  60
NVVKTSPSDE EDVDDGHHHG GGGGSGKEAS QWHRVKWISG MVKLLVSAVA YIDEDVDMDY  120
GTGSAARRKH AMLKRKGKWR LVSAAMTERG FPVSPQQCED KFNDLNKRYK RMTEILGRGT  180
ACQVVEHPEL LEGMRLSGKL KEEARKHLNS KHLHYEEMCS YHNRNKMCLF DDPALQKSLR  240
LALRSGEEHA KKNPFGYDDE DFSDDDDEDE EFDDLEVSAE DHHHGIHGAK RLKHDQEETH  300
FGSNLSEVAV IDMNKMLSEG SGGPTAEKSP STPGMRDIRL EKRRLKIKAQ MLKIEQKHFK  360
WLRFSKEKDR ELEKMRLENE KMKLENERLE LELKLKEIEM GIKPKKIFSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-63	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G07200.1