PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G26190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family AP2
Protein Properties Length: 439aa    MW: 47669 Da    PI: 7.573
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G26190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-1889138155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GV++++++grW+++I+d      + k+++lg f+ta+ Aa+a+++a+ k++g
  ONIVA06G26190.1  89 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDQAAIKFRG 138
                      78*******************......55************************997 PP

2AP240.56.8e-13181229153
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                      s+++GV+ +k  g+W+A+I         +k+++lg ++t+ eAaka+++a+ k 
  ONIVA06G26190.1 181 SRFRGVTLHK-CGKWEARIGQlM----GKKYVYLGLYDTEMEAAKAYDKAAIKC 229
                      789*******.7******77733....25**********77*********9885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MAATFYGVGS IALAMHEDDE EEGSGRVFGF AAGDLVRPAV VTQQLFPMTA AAAAVVPEST  60
EQRHVAAAAE QWARPPSRKT RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD  120
TAQAAARAYD QAAIKFRGVE ADINFTLDDY KEDIKKMNNF SKEEFVQVLR RQGVGFVRGS  180
SRFRGVTLHK CGKWEARIGQ LMGKKYVYLG LYDTEMEAAK AYDKAAIKCC GKEAVTNFDT  240
QSYEDELNLQ SWDSELDLEL SLGCSGGERA AGEVLHSAPS NQRTSLTFML PEEEEMTACH  300
RQKSIWARPS LAPAMPDGGA VIRPDQHQHH PSSRNMLLMS QVISSSGGGG GSGRQGAAEL  360
HMRPRHGWSS GGNNWAPPYA ARPRLPGAED DDDDDSAAAA SSGFPMGQVA TASSSSRPSS  420
SSCSSRRSST AAATTTTGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.16e-87AP2 family protein