PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G15740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 205aa MW: 22083.6 Da PI: 4.7603 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78 | 6.8e-25 | 19 | 66 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 ri+n+ +rqvtfskRrng++KKA+ELS+LC+a vav+ fss g+++ + ONIVA06G15740.1 19 RIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAF 66 8*******************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MVRSRGRPSL GRQRIEIRRI DNSGRRQVTF SKRRNGLFKK ASELSTLCGA SVAVVAFSSA 60 GNVFAFGQPT VDAVVRLFDP LHADGADPAP AAVEDGGGGG DDVVVADPEE LDALRRAEEQ 120 TKAQVAAEQA RMRDVGDKVT QAMAGRPLWW EADVEALGEA ELPALERLRD SVHRHASTLA 180 STATPLPPPP EQEEVPELDV SDYSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.3 | 8e-14 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G15740.1 |