PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G29060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 273aa    MW: 28985.4 Da    PI: 8.5918
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G29060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer97.41.1e-303083358
      ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     +vrY+eCl+NhAa++Ggh+vDGCgEfmp +g+   a+alkCaACgCHR+FHR++  
  ONIVA05G29060.1 30 EVRYHECLRNHAAAMGGHVVDGCGEFMPMPGDA--ADALKCAACGCHRSFHRKDDG 83
                     79***************************8876..9*****************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGVAYGRTPP SSSSSPAASA SAGNGAGAAE VRYHECLRNH AAAMGGHVVD GCGEFMPMPG  60
DAADALKCAA CGCHRSFHRK DDGQQQQQLR LLIPSPPTPR VPLLMPLPQP QPHPHPHPQH  120
PYLHPPFPYH HTPSGSGGTT TESSSEERGP PSSSAAAAQG RRKRFRTKFT PEQKEQMLAF  180
AERVGFEVDP WRRVGGEQDL QSGGGAVRLS FETHHGGGVA PSPEFAACAA SSCSAASSWC  240
TMTGRAITTA VTSQRRNQSK PPPQLKLDGD LRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-19ZF-HD family protein