PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G27800.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WOX

Protein Properties

Length: 515aa MW: 54625.1 Da PI: 6.8658

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G27800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.4	3.7e-16	70	129	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++R+++ +eq+++Le F++ +p ++e++++ +l ++ +++V++WFqNr+ + k ONIVA05G27800.1 70 KPRWNPRPEQIRILEGIFNSgMVNPPRDEIRRIRLQLqeygQVGDANVFYWFQNRKSRTK 129 89***************99***********************************99 PP
2	Wus_type_Homeobox	107.7	6.8e-35	69	131	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe +++sG+++P+++ei+ri+ +L+eyG+++d+NVfyWFQNrk+R ++k ONIVA05G27800.1 69 PKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQNRKSRTKNK 131 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MASPNRHWPS MFRSNLACNI QQQQQPDMNG NGSSSSSFLL SPPTAATTGN GKPSLLSSGC 60 EEGTRNPEPK PRWNPRPEQI RILEGIFNSG MVNPPRDEIR RIRLQLQEYG QVGDANVFYW 120 FQNRKSRTKN KLRAAGHHHH HGRAAALPRA SAPPSTNIVL PSAAAAAPLT PPRRHLLAAT 180 SSSSSSSDRS SGSSKSVKPA AAALLTSAAI DLFSPAPAPT TQLPACQLYY HSHPTPLAHD 240 DQLITSPESS SLLLQWPASQ YMPATELGGV FGSSSHTQTP AAITTHPSTI SPSVLLGLCN 300 EALGQHQQET MDDMMITCSN PSKVFDHHSM DDMSCTDAVS AVNRDDEKAR LGLLHYGIGV 360 TAAANPAPHH HHHHHHLASP VHDAVSAADA STAAMILPFT TTAAATPSNV VATSSALADQ 420 LQGLLDAGLL QGGAAPPPPS ATVVAVSRDD ETMCTKTTSY SFPATMHLNV KMFGEAAVLV 480 RYSGEPVLVD DSGVTVEPLQ QGATYYVLVS EEAVH

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MASPNRHWPS MFRSNLACNI QQQQQPDMNG NGSSSSSFLL SPPTAATTGN GKPSLLSSGC  60
EEGTRNPEPK PRWNPRPEQI RILEGIFNSG MVNPPRDEIR RIRLQLQEYG QVGDANVFYW  120
FQNRKSRTKN KLRAAGHHHH HGRAAALPRA SAPPSTNIVL PSAAAAAPLT PPRRHLLAAT  180
SSSSSSSDRS SGSSKSVKPA AAALLTSAAI DLFSPAPAPT TQLPACQLYY HSHPTPLAHD  240
DQLITSPESS SLLLQWPASQ YMPATELGGV FGSSSHTQTP AAITTHPSTI SPSVLLGLCN  300
EALGQHQQET MDDMMITCSN PSKVFDHHSM DDMSCTDAVS AVNRDDEKAR LGLLHYGIGV  360
TAAANPAPHH HHHHHHLASP VHDAVSAADA STAAMILPFT TTAAATPSNV VATSSALADQ  420
LQGLLDAGLL QGGAAPPPPS ATVVAVSRDD ETMCTKTTSY SFPATMHLNV KMFGEAAVLV  480
RYSGEPVLVD DSGVTVEPLQ QGATYYVLVS EEAVH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-46	WOX family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G27800.1