PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G11240.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YC
Protein Properties Length: 327aa    MW: 36700.2 Da    PI: 4.9958
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G11240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC74.71.3e-2331128296
            NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                      ++ fw +    ie +t  ++h lP+  +k+++++ +d  m+sa++P++++k celf+ eltlr+w+ a++ +r  +  +dia+a+t t+ + fl
  ONIVA05G11240.1  31 MEEFWRRSqeqIEASTGNHEHILPIDCVKNVIRQKDDAMMLSADTPTFVTKLCELFVQELTLRAWVCANSHNRDIILGTDIAEAITTTESYHFL 124
                      778997542338888899999************************************************************************* PP

            NF-YC  93 vdiv 96 
                       ++ 
  ONIVA05G11240.1 125 GNVL 128
                      8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAIPTKEEVE HNEEDNTFSR LQLLAQQRHA MEEFWRRSQE QIEASTGNHE HILPIDCVKN  60
VIRQKDDAMM LSADTPTFVT KLCELFVQEL TLRAWVCANS HNRDIILGTD IAEAITTTES  120
YHFLGNVLRS HKALGSTAPD IDTSARKHIK LDQMTSLYHP TQEMQASRLA GYPPHVPIYP  180
PIGQMGTQHT LSPFAFMMQG ESLLNMKREK SLVNEVMVCT NKMSINNFDG ATSIGGGSSS  240
DAAIVVQQGE TTHPFSSQNA CPFLEDNYVV PMPTGHVQSF SPPTNINVKK LHQEEKNIYS  300
QDVAEEDMSN ESLEGSQKDE DLFLHEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.14e-19NF-YC family protein