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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G07370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 511aa MW: 57819.2 Da PI: 7.5357 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.2 | 7.1e-31 | 51 | 101 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ ONIVA05G07370.1 51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 101 79***********************************************95 PP | |||||||
2 | SRF-TF | 82.2 | 3.3e-26 | 316 | 364 | 3 | 51 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ie++ rqvtf+kR ng+lKKA+ELS LCdaeva+i+fss+g+lyeys+ ONIVA05G07370.1 316 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSN 364 99*********************************************95 PP | |||||||
3 | K-box | 103.5 | 2.7e-34 | 119 | 215 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+ + + e +a+++qqe+akLk++i nLq+ +R l+G++++s++++eL+qLe +L+k+l kiR++Knell+++ie++q++e elq++n++L++k ONIVA05G07370.1 119 SNASTVVEINAQHYQQEAAKLKQQITNLQNANRTLVGDNITSMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSK 212 3344488999************************************************************************************ PP K-box 98 lee 100 ++e ONIVA05G07370.1 213 VAE 215 986 PP | |||||||
4 | K-box | 45.6 | 3e-16 | 382 | 471 | 4 | 95 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLsl.keLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 s+ + ++e +a+++qqe+akLk+ i Lq+++R ++ +L+ L++ +L ++ +L +l+kiR++Kne+++++ie++q++e elq++n++ + ONIVA05G07370.1 382 SNASTVAEINAQHYQQEAAKLKQHITYLQNSNRFII--SLSCLDFfFQLDKVV-HLVIGLEKIRARKNEYMCAEIEYMQRRETELQNDNMYSK 471 44444999**********************977765..788777524666664.5889*******************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence |
MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ 60 VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVKETIER YKKANSDTSN 120 ASTVVEINAQ HYQQEAAKLK QQITNLQNAN RTLVGDNITS MNHRELKQLE GRLDKGLGKI 180 RARKNELLCA EIEYMQRRET ELQNDNMYLK SKVAESERGL QTVNMMGSAS TSEYVQNMIH 240 YDPRNFLQFN IMHQPQYYPE QEDRKAFMSG LALSREDLAI MHIYKEQEAE PSTGLMMPEP 300 APAASPGSGS SEGSGIEDTA DRQVTFCKRC NGLLKKAYEL SMLCDAEVAL IVFSSRGRLY 360 EYSNNSVEET IERYKKANSD TSNASTVAEI NAQHYQQEAA KLKQHITYLQ NSNRFIISLS 420 CLDFFFQLDK VVHLVIGLEK IRARKNEYMC AEIEYMQRRE TELQNDNMYS KSERTANSEH 480 DGLSIYERVR AKYDPLRSKK LPAIQYHAAA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 2e-91 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G07370.1 |