PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G01910.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 330aa MW: 36655.6 Da PI: 6.1586

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G01910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63	6.7e-20	54	118	1	65
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 +W++ e+ a +++r ++++++ ++k++k+lWe+ s+++++ gf r+p qCk+kw+nl +r+k ++ ONIVA05G01910.1 54 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAASARLHALGFARTPDQCKSKWKNLVTRFKGTE 118 7*************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MDPFHHLNSS FSNPYHPLLA SPPHHFAPDP LPPPPPPPLL PADPPSLERE RLPQWSHAET 60 AAFLAIRADL DHSFLSTKRN KALWEAASAR LHALGFARTP DQCKSKWKNL VTRFKGTEGA 120 AAVAAAGTDQ MQGGQGGGAA ARGSSSSFPF HDELRRIFDA RVERARALER KKVKGKDPDD 180 DHDGGGDGDE DDEEEADQQV DEEDDGASGD TTRAGSKKRR RKAAAAARRT GSTGGVEGEV 240 EAMLREFMRR QIEMEERWME AAEAREAERR AREEEWRTAM VALGEERLAL VRRWREREDA 300 WRARAEEREE RRHQLVAALL AKLGAGDASA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	222	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-26	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G01910.1