PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G27090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WOX | ||||||||
Protein Properties | Length: 288aa MW: 30564.8 Da PI: 7.934 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.3e-19 | 34 | 94 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t+eq+++L el+++ r p+ e+++++A+ l +++ ++V++WFqN++a+e++ ONIVA04G27090.1 34 TRWTPTTEQIKILRELYYScgIRSPNSEQIQRIAAMLrqygRIEGKNVFYWFQNHKARERQ 94 7*****************7668*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.6 | 4.8e-37 | 33 | 96 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRWtPt+eQikiL+ely+ +G+r+Pn+e+iqri+a+L++yG+ie+kNVfyWFQN+kaRerqk+ ONIVA04G27090.1 33 GTRWTPTTEQIKILRELYYsCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKK 96 69***************9978*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MDHMQQQQRQ QVGGGGGEEV AGRGGVPVCR PSGTRWTPTT EQIKILRELY YSCGIRSPNS 60 EQIQRIAAML RQYGRIEGKN VFYWFQNHKA RERQKKRLTT LDVTTTTAAA ADADASHLAV 120 LSLSPTAAGA TAPSFPGFYV GNGGAVQTDQ ANVVNWDCTA MAAEKTFLQD YMGVSGGGGA 180 AAAAPTPWAM TTTREPETLP LFPVGGGGGD GAHRHAGHGG FPSNFQRWGS AAATTNTTTV 240 QQHLQQHNFY SSSSSQLHSQ DGPAAGTSLE LTLSSYYCSC SPYPAGSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-34 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G27090.1 |