PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G18650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | Trihelix | ||||||||
Protein Properties | Length: 209aa MW: 22664.9 Da PI: 10.7441 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29.5 | 2e-09 | 24 | 85 | 1 | 65 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 +Wt +e+laL +a++ + +++r+ l ++W++v+++ ++++ qC++k e+l++r + + ONIVA04G18650.1 24 CWTPDETLALARAYTARRLAVGRAHLTSADWAAVADAATP---TKTARQCRHKVEKLRRRLRSKR 85 8**********************************98766...57889***********998766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MASSSPTNAA AAAAAAARRV PPPCWTPDET LALARAYTAR RLAVGRAHLT SADWAAVADA 60 ATPTKTARQC RHKVEKLRRR LRSKRRRPCP LLDAIDLLDG PSPSASPSQS PSPPPPASPP 120 PLPPAPSSPP PKKRRLPDAD ADADAEDDGE SDVVKALRAI GEGFLRAEQR RMEAARKTQQ 180 MRMEMALRHL DSQRRLMEAL VDRIIDSLE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 82 | KLRRRLR |
2 | 77 | 83 | LRRRLRS |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G18650.1 |