PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G18450.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

DBB

Protein Properties

Length: 329aa MW: 35044 Da PI: 5.4616

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G18450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.1	1.3e-06	78	118	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ + + ++ fC ++ lC+ C H+ H+ ONIVA04G18450.1 78 VQCDVCAAEAASVFCCADEAALCDACDRRVHSAnklagkHR 118 68**************************9996566777776 PP
2	zf-B_box	25.7	2.3e-08	134	167	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 +++ C+ ++ek+ lfC++++ lC++C ++ H ONIVA04G18450.1 134 KPPLCDICQEKRGFLFCKEDRAILCRECDVAVHT 167 6899***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MVALPVLSSG DGPSGDTKSD LVTWIGGDCS KEGLWQDSDE LNGDASGNQG GRKARSRRRA 60 RWRCQKWLGS NVLSRAKVQC DVCAAEAASV FCCADEAALC DACDRRVHSA NKLAGKHRRF 120 SLLQPLASSS SAQKPPLCDI CQEKRGFLFC KEDRAILCRE CDVAVHTTSE LTRRHGRFLL 180 TGVRLSSAPM DSPAPSEEEE EEAGEDYSCS PSSVAGTAAG SASDGSSISE YLTKTLPGWH 240 VEDFLVDEAT AAAAAASSSS DGLFQGGLLA QIGGVPDGYA AWAGREQLHS GVAVAADERA 300 SRERWVPQMN AEWGAGSKRP RASPPCLYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-27	DBB family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G18450.1