PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G14730.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 849aa MW: 91897.4 Da PI: 9.131

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G14730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.5	2.8e-26	513	581	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W ++e+l+Li++rrem+++++++k++k+lWe++s++mre+gf rsp++C++kw+nl k++kk + ++++ ONIVA04G14730.1 513 WVQDETLCLIALRREMDSHFNTSKSNKHLWEAISARMREQGFDRSPTMCTDKWRNLLKEFKKARSHARG 581 ***************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MSSSSSSPRA PGDRKRCRRA SGPVPRWASL PEDLVDLVAS RLLAGGDLLD YVRFRAVCTS 60 WRSGTASPRG RGVADRRFHP RRWMMLPEGH GLYPGHPSLR GYARFLNLDT GTLVRARIPL 120 LRDGYVAIDS VDGLLLLLLD PDPNQEGAVR LLRPFTGDTA ELPPLGTVLP HLGSRLLDCP 180 APATGAGAGA ITVLLALSVV SRVAFATSLD RQWSLSTYEC VTLSSPIASH GKIYLMHTDR 240 SCGEKMHQIL RIDHPPAAAQ DGSGSGAGRA LQEPKLVATI PARKLDHFQG LVECGSEILV 300 LGYKNWSTSR ISVFKLADLV LQRFMPIKSI EGHTLFIGER NISVSSKILP TVKGDNLVYL 360 NSGLVKYHLS SGSLSLAIDN CSLYGRAPGP SSLVHYIYSC CIRNRWELGP GRAERPSHLP 420 RVPPGSPRLR SPTAATTAPV TSPIAGFPFA HGTTPRAPPR PAAAMLLSGP SPQQPTPPLL 480 LPESSGEDGG HDSSSRAAAS GGGGGPKKRA ETWVQDETLC LIALRREMDS HFNTSKSNKH 540 LWEAISARMR EQGFDRSPTM CTDKWRNLLK EFKKARSHAR GGGGGGVGGG GAGTGGGNCP 600 AKMACYKEID DLLKRRGKPT GGGGAAVGSG AVKSPTVTSK IDSYLQFDKG FEDASIPFGP 660 VEASGRSLLS VEDRLEPDSH PLALTADAVA TNGVNPWNWR DTSTNGGDNQ VTFGGRVILV 720 KWGDYTKRIG IDGTAEAIKE AIKSAFGLRT RRAFWLEDED EVVRSLDRDM PVGTYTLHLD 780 TGMTIKLYMF ENDEVRTEDK TFYTEEDFRD FLSRRGWTLL REYSGYRIAD TLDDLRPGVI 840 YEGMRSLGD

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MSSSSSSPRA PGDRKRCRRA SGPVPRWASL PEDLVDLVAS RLLAGGDLLD YVRFRAVCTS  60
WRSGTASPRG RGVADRRFHP RRWMMLPEGH GLYPGHPSLR GYARFLNLDT GTLVRARIPL  120
LRDGYVAIDS VDGLLLLLLD PDPNQEGAVR LLRPFTGDTA ELPPLGTVLP HLGSRLLDCP  180
APATGAGAGA ITVLLALSVV SRVAFATSLD RQWSLSTYEC VTLSSPIASH GKIYLMHTDR  240
SCGEKMHQIL RIDHPPAAAQ DGSGSGAGRA LQEPKLVATI PARKLDHFQG LVECGSEILV  300
LGYKNWSTSR ISVFKLADLV LQRFMPIKSI EGHTLFIGER NISVSSKILP TVKGDNLVYL  360
NSGLVKYHLS SGSLSLAIDN CSLYGRAPGP SSLVHYIYSC CIRNRWELGP GRAERPSHLP  420
RVPPGSPRLR SPTAATTAPV TSPIAGFPFA HGTTPRAPPR PAAAMLLSGP SPQQPTPPLL  480
LPESSGEDGG HDSSSRAAAS GGGGGPKKRA ETWVQDETLC LIALRREMDS HFNTSKSNKH  540
LWEAISARMR EQGFDRSPTM CTDKWRNLLK EFKKARSHAR GGGGGGVGGG GAGTGGGNCP  600
AKMACYKEID DLLKRRGKPT GGGGAAVGSG AVKSPTVTSK IDSYLQFDKG FEDASIPFGP  660
VEASGRSLLS VEDRLEPDSH PLALTADAVA TNGVNPWNWR DTSTNGGDNQ VTFGGRVILV  720
KWGDYTKRIG IDGTAEAIKE AIKSAFGLRT RRAFWLEDED EVVRSLDRDM PVGTYTLHLD  780
TGMTIKLYMF ENDEVRTEDK TFYTEEDFRD FLSRRGWTLL REYSGYRIAD TLDDLRPGVI  840
YEGMRSLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-128	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G14730.1