PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G11340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 288aa    MW: 29223.6 Da    PI: 8.1747
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G11340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer88.18.7e-282774557
      ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                     +YkeC++NhAa++Gg+a+DGCgE+mp+     ++++lkCaACgCHR+FHRr  
  ONIVA04G11340.1 27 KYKECMRNHAAAMGGQAFDGCGEYMPA-----SPDSLKCAACGCHRSFHRRAA 74
                     7*************************9.....799****************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDHLSLVPYE GGSAGGGGGG GGGGGGKYKE CMRNHAAAMG GQAFDGCGEY MPASPDSLKC  60
AACGCHRSFH RRAAAGIGGG PVFFRPPPPP QPHSHHAALQ GFLPSSVPAP PPPPQLALPY  120
HAVPAAAWHH AAAAAAGRAG SETPPRMDDF GPGSAGGSGS GGGGIFGRKR FRTKFTPEQK  180
ERMREFAEKQ GWRINRNDDG ALDRFCVEIG VKRHVLKVWM HNHKNQLASS PTSAAAAAAG  240
VMNPGAGIGL GTGLGTGISG DGDGDDDDTD DSPPRAAVSS PSPSPISV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.16e-20ZF-HD family protein