PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G06840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARR-B
Protein Properties Length: 326aa    MW: 36407.6 Da    PI: 4.8317
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G06840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.75.9e-09119165455
          G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      l Wtp L ++F++a+e LG + +      l +m+v+ + ++++  HLQk+Rl
  ONIVA04G06840.1 119 LMWTPHLQKKFLHALEILG-EGQ----ISLMIMDVDNIDRKQISTHLQKHRL 165
                      78****************5.542....34789*******************7 PP
2Response_reg27.22e-101597282
                     EEESSSHHHHHHHHHHHH.HTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS
     Response_reg  2 livdDeplvrellrqale.kegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82
                     +++d+++  ++  ++++  + ++  v++++++ +al+ l+++   ++l+l D++m +m+G+e+lk  re +++++ i v+++++
  ONIVA04G06840.1 15 MVIDEDKCHADSTCSMICtQLNF-CVTVFTSPIKALDFLQNQAegVHLVLADVQMEEMNGFEFLKVARELHKSIQAISVGDKST 97
                     6776666666665555554999*.***************999999********************9999999999998888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAQNEGIPNG TLSAMVIDED KCHADSTCSM ICTQLNFCVT VFTSPIKALD FLQNQAEGVH  60
LVLADVQMEE MNGFEFLKVA RELHKSIQAI SVGDKSTCAN EMNSFPENQK DGTKRKYYLM  120
WTPHLQKKFL HALEILGEGQ ISLMIMDVDN IDRKQISTHL QKHRLPLKKK LSKASFTKGS  180
NEDTSNPSAK NHLTCRTMTL QPHPYTNQPA ETTMQIHSED VEHDDVYDAM RRALQDGTAF  240
DESKYSSDPF SNEDEDVVGD GYADKANAID SSGDHYQVAV VLTTPHNVDY TQEIMNKVTT  300
SDDVQVTRGG KATVSRLVDY SDSDSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-09G2-like family protein