PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G33590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 238aa MW: 24295 Da PI: 8.0118 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 86.3 | 3.3e-27 | 10 | 60 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 +Y+eC++NhAa+lG++a DGC+E++p+ +g++a+l CaACgCHRnFHR++ ONIVA03G33590.1 10 EVYRECMRNHAAKLGTYANDGCCEYTPD---DGHPAGLLCAACGCHRNFHRKDF 60 68*************************8...789******************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEQQQERPRE VYRECMRNHA AKLGTYANDG CCEYTPDDGH PAGLLCAACG CHRNFHRKDF 60 LDGRATAAAG GAGGAGVGVA PMLPAPGGGG PPGYMHMAAM GGAVGGGGGV DGGGGSGGRR 120 RTRTKFTEEQ KARMLRFAER LGWRMPKREP GRAPGDDEVA RFCREIGVNR QVFKVWMHNH 180 KAGGGGGGGG SGGPGAGGGA QTSSSTTRGG GDVGVGLSPA MGGDGEDDEE VRGSEMCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-32 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G33590.1 |