PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G32300.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 398aa    MW: 41195 Da    PI: 7.0259
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G32300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.63.1e-28160213358
      ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      ++r++eClkNhAa++G+h++DGCgEfm+s+g+   aaal CaACgCHR+FHRre++
  ONIVA02G32300.1 160 TWRHRECLKNHAARMGAHVLDGCGEFMSSPGDG--AAALACAACGCHRSFHRREPA 213
                      6799*************************8887..99****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MEYKRSSHVE EEEEEEEEED DEEEDEEEQG HHQYTTAAAQ QQLHPQVLGS SASSPSSLMD  60
SAAFSRPLLP PNLSLVSPSA AAAAAPGGSY LHAAHHHGQG RRVEAPGGES QHQLQRHHEP  120
ARNGVLGGVA GAHAASTLAL VGGGGGGPRG GEGAAGEAPT WRHRECLKNH AARMGAHVLD  180
GCGEFMSSPG DGAAALACAA CGCHRSFHRR EPAVVAPASL SLCPASASAS AAAGLVSLSP  240
SATPTGANSS RLMPLLLAPP HMQKRPPVLP VSPASAPAAL AESSSEELRP PPLPSSHPHA  300
HAAAVVAASA SAPPGPSKKR FRTKFTAEQK ERMREFAHRV GWRIHKPDAA AVDAFCAQVG  360
VSRRVLKGGD TSTALAAKPP FLRAFAAFFG GQFCLSCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-16ZF-HD family protein