PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G28330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | DBB | ||||||||
Protein Properties | Length: 270aa MW: 28381.6 Da PI: 5.3295 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.3 | 1.1e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ + + ++ fC ++ lC+ C H+ H+ ONIVA02G28330.1 4 QCDVCAAEAASVFCCADEAALCDACDRRVHRAnklagkHR 43 7*****************************7677777776 PP | |||||||
2 | zf-B_box | 23.9 | 8.4e-08 | 62 | 94 | 3 | 35 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 ++ C+ ++ek+ lfC++++ lC++C + H ONIVA02G28330.1 62 APLCDICQEKRGFLFCKEDRAILCRECDVPVHT 94 689*************************99884 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MKVQCDVCAA EAASVFCCAD EAALCDACDR RVHRANKLAG KHRRFSLLNP SASGRSPTST 60 TAPLCDICQE KRGFLFCKED RAILCRECDV PVHTASELTM RHSRYLLTGV RLSSEPAASP 120 APLSEEENSS SFCCSADDAV PAPAAPATSH GGSSGSSSIS EYLTTLPGWH VEDFLIDDAT 180 AEAAAAAAAT SSGISANGPP CQGVTRIGGL QESAGYPAWM AQQQLCCDGL VAGDASPASR 240 ERWVPQMYAD QLAAGSKRSR TSTASSYSYW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39070.1 | 2e-35 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G28330.1 |