PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G07230.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARR-B
Protein Properties Length: 659aa    MW: 72316.6 Da    PI: 6.6439
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G07230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.27.8e-28213266155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+ +t+e+v+SHLQkYRl
  ONIVA02G07230.1 213 KPRVVWSVELHRKFVAAVNQL-GIEKAVPKKILDLMNVENITRENVASHLQKYRL 266
                      79*******************.********************************8 PP
2Myb_DNA-binding35.91.7e-11215265148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ ++ t++++ s++qky+
  ONIVA02G07230.1 215 RVVWSVELHRKFVAAVNQLGIEkaVPKKILDLMNvENITRENVASHLQKYR 265
                      678***********************************************7 PP
3Response_reg78.81.9e-26311391109
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl vdD+p+ +++l+++l + +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+ge +++ + +  
  ONIVA02G07230.1  31 VLAVDDDPTCLKILENLLLRCQY-HVTTTGQAATALKLLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITH 122
                      799********************.***************888889*******************87754.558********************* PP

                      TESEEEESS--HHHHHH CS
     Response_reg  93 GakdflsKpfdpeelvk 109
                      Ga d+l Kp+  e+l++
  ONIVA02G07230.1 123 GACDYLLKPVRLEQLRT 139
                      **************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MTVEERQGRV GGHGVSGGGG GRDQFPVGMR VLAVDDDPTC LKILENLLLR CQYHVTTTGQ  60
AATALKLLRE NKDQFDLVIS DVHMPDMDGF KLLELVGLEM DLPVIMLSAN GETQTVMKGI  120
THGACDYLLK PVRLEQLRTI WQHVIRRKNC DAKNRGNDDD AGQKAQGMNN EGESIGANRN  180
KRQSRKSRDE NGDDGDDSDE NSNENGDSST QKKPRVVWSV ELHRKFVAAV NQLGIEKAVP  240
KKILDLMNVE NITRENVASH LQKYRLYLKR LSTDASRQAN LAAAFGGRNP AYINMNSFGN  300
YNAYGRYRTV PTAGHTQANN ILTRMNSPSA FGVHGLLHSQ PIQLGHAQNN LSTSLNDLGG  360
LNNGNMIRGA QMSTILTGPS GNSFPNISNG APLATANRSL QHLESSNQQH LSRVHSSSAD  420
PFSTLVGESP QFPDLGRTTN TWQTAVPSNI QDRGHNDNMS QATLHMNGPK IEPVSSFTSS  480
NQIPLLGNEM QGQVASLASN VPIAFNQDTS PFNYGSSTNS RDMLNNSHVF SNSSINTSLP  540
NLSLDNPAVP KQTLDRGNTG IVSPMQDGRI HHQAVSNQLN YNDDLMRTTG LQRGLSGGLD  600
DIVVDMFRPD REDDGVPYID GDWELFCEDG KNSCVRLRPE LRILKLQISE EKLLNYSLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-112ARR-B family protein