PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G05730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NF-YC | ||||||||
Protein Properties | Length: 259aa MW: 28789.3 Da PI: 4.6278 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 178.3 | 7.3e-56 | 83 | 187 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 ql+ fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdi+df ONIVA02G05730.1 83 QLREFWANQmeeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDF 176 89******9777789******************************************************************************* PP NF-YC 92 lvdivprdelk 102 lvdivprde+k ONIVA02G05730.1 177 LVDIVPRDEMK 187 ********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEPSSQPQPV MGVATGGSQA YPPPAAAYPP QAMVPGAPAV VPPGSQPSAP FPTNPAQLSA 60 QHQLVYQQAQ QFHQQLQQQQ QQQLREFWAN QMEEIEQTTD FKNHSLPLAR IKKIMKADED 120 VRMISAEAPV VFAKACEVFI LELTLRSWMH TEENKRRTLQ KNDIAAAITR TDIYDFLVDI 180 VPRDEMKEEG LGLPRVGLPP NVGGAADTYP YYYVPAQQGP GSGMMYGGQQ GHPVTYVWQQ 240 PQEQQEEAPE EQHSLPESS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 162 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 3e-74 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G05730.1 |