PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G48580.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Trihelix
Protein Properties Length: 298aa    MW: 31579.3 Da    PI: 7.5626
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G48580.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.25e-242394171
         trihelix  1 rWtkqevlaLiearremeerlrrgklk.kplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                     rWt++e+l+L++arr me+r rr+ +    +W++vs+++r++g+er+p qC+++w nl+++ kki ++ek+ 
  ONIVA01G48580.2 23 RWTRHETLVLLQARRAMEHRGRRSPQPvRLKWAAVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKNL 94
                     8**********************97764889**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSGAANATSP AAGAGTPRSR LPRWTRHETL VLLQARRAME HRGRRSPQPV RLKWAAVSAY  60
CRRHGVERGP MQCRKRWGNL SWDLKKIVAW EKNLAAVVSG AGDNAVAAGE GEGEAPPPPR  120
LESFWDMRGE QRRARQLPSS FDREVYDALV GGHGAAPPSD FGEDLADGDG VDADELPPPP  180
LMVMPISATV SAKRGGAASD KNSTSQHDGG GGGGLKDSEA TYDAGVGGEE GTTTATATAT  240
TTSIGRQVIE ALERGNRMLG DQLEAQRAAW DAEREQRVAL LAAVDKLAGA VCRIADKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.14e-43Trihelix family protein