PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G23150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NF-YC

Protein Properties

Length: 443aa MW: 48776.3 Da PI: 4.8588

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G23150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	86.6	2.6e-27	21	122	1	99
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 q+ fw ++ ie+++df +h++P+ar+kki+ +++ m++ + P++lsk celf+ el++r+w a++ +r + +dia+a+++t+ +df ONIVA01G23150.1 21 QMDEFWRDRqkeIETTKDFSEHAIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQELAVRAWASAQSHNRCIILDTDIAKAIASTESYDF 114 68899765566******************************************************************************* PP NF-YC 92 lvdivprd 99 lvdi ++ ONIVA01G23150.1 115 LVDILRNH 122 *98665 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEQTLDVPRS LRLPAPKAQQ QMDEFWRDRQ KEIETTKDFS EHAIPMARLK KIVSSQKGNM 60 MMTFDMPAFL SKMCELFVQE LAVRAWASAQ SHNRCIILDT DIAKAIASTE SYDFLVDILR 120 NHRVKHKSTP CSTLTTKRCR LVDQPSTSHM PYQHQLPQFA PTYTPAIPIT PSLMPPISHY 180 IPFQYPSLSQ EVSPMMASAP IVNRSMLLIH NIARGLSLQG NNISMFANNN IPDNIVGFSS 240 PAVLASMMSP ALLEVAGTSL NPPNSHSICT MNMINSSDPS GSSVGDINVA NQASLAPSGH 300 FNPAILRESS CPSFLHSNNN DTIVSIPEGV DISGTMDVAS DVAAIVINGQ EEHERETNVE 360 HHQQNEIYES IDIGIINASV ADGNKCSISW DELGMADDSL LDKFLEEFQV RNDGVLCTGI 420 ELHEDPFLGD VMLEIPSTSN ANK

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEQTLDVPRS LRLPAPKAQQ QMDEFWRDRQ KEIETTKDFS EHAIPMARLK KIVSSQKGNM  60
MMTFDMPAFL SKMCELFVQE LAVRAWASAQ SHNRCIILDT DIAKAIASTE SYDFLVDILR  120
NHRVKHKSTP CSTLTTKRCR LVDQPSTSHM PYQHQLPQFA PTYTPAIPIT PSLMPPISHY  180
IPFQYPSLSQ EVSPMMASAP IVNRSMLLIH NIARGLSLQG NNISMFANNN IPDNIVGFSS  240
PAVLASMMSP ALLEVAGTSL NPPNSHSICT MNMINSSDPS GSSVGDINVA NQASLAPSGH  300
FNPAILRESS CPSFLHSNNN DTIVSIPEGV DISGTMDVAS DVAAIVINGQ EEHERETNVE  360
HHQQNEIYES IDIGIINASV ADGNKCSISW DELGMADDSL LDKFLEEFQV RNDGVLCTGI  420
ELHEDPFLGD VMLEIPSTSN ANK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	1e-24	NF-YC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G23150.1