PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G08670.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

DBB

Protein Properties

Length: 357aa MW: 37134.2 Da PI: 6.3796

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G08670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.9	6.4e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C l+ H H + ONIVA01G08670.1 4 LCSACEAAEARVLCCADDAALCARCDLHVHAAnrlagkHHR 44 7****99*******************55678888554 PP
2	zf-B_box	30.2	9e-10	60	100	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +++C+ +++ ++ +fC +++ llC+ C ++ H H ONIVA01G08670.1 60 PPTCDICQDAHAYFFCVEDRALLCRACDVAVHTAnalvsaH 100 789***************************99545566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKVLCSACEA AEARVLCCAD DAALCARCDL HVHAANRLAG KHHRLPLLSS SSSSSSSPSP 60 PTCDICQDAH AYFFCVEDRA LLCRACDVAV HTANALVSAH RRFLLTGVHV GLDAAADDDD 120 KHPPHPLSSS LPRNTAPPPQ PPPKRSPSPI YSDDDVIDWA TGGHDIGITG NLPDWSLVDE 180 QFNTPALPPV VTKTPPKRAS RGPVTAGTAA AVFGNLAGGS PDWPLNEFFG FADFSSGFGF 240 AENGTSKADS GKIGSMDGSP NGGRSSSSSS SSSAAAAAAG GGQDFFGQVP EVHWAVPELP 300 SPPTASGLHW QRDPRYGGGA TDASAVFVPD ISSPENPFRC FAAAGAGDHT MKRRRRC

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKVLCSACEA AEARVLCCAD DAALCARCDL HVHAANRLAG KHHRLPLLSS SSSSSSSPSP  60
PTCDICQDAH AYFFCVEDRA LLCRACDVAV HTANALVSAH RRFLLTGVHV GLDAAADDDD  120
KHPPHPLSSS LPRNTAPPPQ PPPKRSPSPI YSDDDVIDWA TGGHDIGITG NLPDWSLVDE  180
QFNTPALPPV VTKTPPKRAS RGPVTAGTAA AVFGNLAGGS PDWPLNEFFG FADFSSGFGF  240
AENGTSKADS GKIGSMDGSP NGGRSSSSSS SSSAAAAAAG GGQDFFGQVP EVHWAVPELP  300
SPPTASGLHW QRDPRYGGGA TDASAVFVPD ISSPENPFRC FAAAGAGDHT MKRRRRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	5e-30	DBB family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G08670.1