PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G05280.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 288aa MW: 31407.7 Da PI: 6.7278

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G05280.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9e-34	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFveav+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl OGLUM09G05280.3 23 RQRLRWTNELHERFVEAVTQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRL 77 58****************************************************8 PP
2	Myb_DNA-binding	63.4	4.3e-20	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av+qlGg+ t+k + r mg +g+t +++ks++qky+ OGLUM09G05280.3 25 RLRWTNELHERFVEAVTQLGGPdraTPKGVLRIMGvQGLTIYHVKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MELGGNNMGP DNGANNNSNL AARQRLRWTN ELHERFVEAV TQLGGPDRAT PKGVLRIMGV 60 QGLTIYHVKS HLQKYRLAKY IPDSSADGNK AENKDPGDLL AGLEGSSGLQ ISEALKLQME 120 VQKRLHEQLE VQRQLQLRIE AQGKYLKKII EEQQRLGGVK SETPAAGASV TLPSDQFPDS 180 ERTDPSTPAP TSESPTQGVP SNRDNGGRNE ATKSPQRDDS LSRHEPLTPD SNCQPGSPTA 240 SPKHERAAKR QRGNGAEFSE TDFALPHSIF ESSSGSEFQQ CSMSYSGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-81	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G05280.3