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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 412aa MW: 45594 Da PI: 8.5018 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.1e-17 | 69 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g Oeu060333.1 69 SVYRGVTRHRWTGRYEAHLWDkSTWNQsqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 128 78*******************666677776447*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MASSSSKPEE FGGGGGGRGG ESSEAAAFPL DTDKLLLYRG LKKAKKERGC TAKDRISKMP 60 PCTAGKRSSV YRGVTRHRWT GRYEAHLWDK STWNQSQNKK GKQVYLGAYD DEEAAARAYD 120 LAALKYWGPG TLINFPVKDY TRDLEEMQNV SREDYLASLR RKSSGFSRGI SKYRPLSSRW 180 DSQFGHMPEA AYFNNTLYGS GDERSIESEY AGGFCIDRKI DLSSYIKWWG ANKSSQTDSH 240 SKSLDETKHG CPEDIGSELK ALERSNKPTE PYEMPCLGLS LEGKKHKTVS AMNILSQSAA 300 YKSLQENALK KKEKDENDEN ENKSSIKKID LGKTDEKFWH DGENERLGVA SGIAGGLSMQ 360 RNAYPLAPLL SAPLLTNYNA IDPLTDPVLW SSLVSVLPTG SSHTTEVCLF S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-134 | AP2 family protein |