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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu055051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 467aa MW: 50996.6 Da PI: 6.6359 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.6e-17 | 157 | 206 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Oeu055051.1 157 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 206 78*******************......55************************997 PP | |||||||
2 | AP2 | 38.8 | 2.3e-12 | 249 | 296 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ + +k+ +lg f+++ eAa+a+++a+ k Oeu055051.1 249 SKYRGVTLHK-CGRWEARMGQY--L-GKKYTYLGLFDSEVEAARAYDEAAIK 296 89********.7******5552..1.25**********99*********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MLDLNIEAVS VDSSKWEDET DYHRKMGITP IIAVAEGDSL TSTTTSATNN AVEADEQDTN 60 SSTRRNSLST LNFSILKTNI IEISDDQNND DKKSSSELQL FPTSANDAAS PSAASMAKFW 120 LNLSVPEVPG ELGNHKALRQ QPPAVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK 180 QVYLGGFDTA LAAARAYDRA AIKFRGVDAD INFNISDYDV DMEQIKNLTK EEFIHTLRRQ 240 STGFARGSSK YRGVTLHKCG RWEARMGQYL GKKYTYLGLF DSEVEAARAY DEAAIKSSGG 300 DAVTNFEPGI YEKEINMAAG GGVSGNSLDL NLGISCSSVG VQGNENTRNV HFQYGSCELR 360 DGKKTKGESS SNAHDLATAP KYAPLWTGER ATGMNTEANA LPVFSNWPWK MQNIGVITPV 420 PLLSSAASSG FSSVTIPPSN SVESSNIPTT ISCYTFQRPP TTLDYK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 3e-92 | AP2 family protein |