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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu052052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 533aa MW: 59080.9 Da PI: 6.1982 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.1 | 6.1e-15 | 167 | 226 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Oeu052052.1 167 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 226 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 48 | 3.1e-15 | 271 | 320 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Oeu052052.1 271 YRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDVAAIKFRG 320 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MNSNNWLSFP LSPTHSSLPP HLQTAQSHQF SLGLVNDNID TPLHNQEWNL INSEGNNEVP 60 KVADFLGVGK SDNHAELVPY SAIQSSDSDY LFSNNSLVSV QHSMAVASDN YDLQENPCNM 120 QSLTLSMGTG KGLTSENSAT VSADNSNTSI VEAAPRRTLD TFGQRTSIYR GVTRHRWTGR 180 YEAHLWDNSC RREGQSRKGR QVYLGGYDKE EKAARAYDLA ALKYWGTSTT TNFPINNYDK 240 ELEEMKHMTR QEFVASIRRK SSGFSRGASM YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 300 FSTEEEAAEA YDVAAIKFRG LNAVTNFDMN RYDVKAILDS NSLPIGGGAA KRLKEAQAVE 360 SSRKREEMIS LGSNYQYGSS SSIPLAYPLM QQPFDHTQPL LTLQNQDLSP YNTNQDSHYQ 420 NYIHKQLQLH QQSSSYNPQF YNNSLQNNPI LLHGLMNTGS SSVMDSNCSS IGSYGGGYLG 480 MASNSIPDNG GGSAEELALM KVDYDMPSTN YAGWSGDSVQ GSNPDDFTMW ND* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |