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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu046544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 347aa MW: 38418.6 Da PI: 8.9625 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.6 | 3.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien + rqvtfskRr g++KKAeELSvLCda+va+iifsst+kl+ey+s Oeu046544.1 9 KKIENATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTDKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 49.2 | 2.3e-17 | 92 | 172 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++ L+kei + +++R+l Ge+L+ Ls++eLq+Le+ Le +l+++ +kK e ++++i++lq+k +l een++Lr+++ Oeu046544.1 92 RNHSTLRKEIAEKSHQLRRLRGEELQGLSIEELQHLESSLEAGLNRVIEKKGEKIKKEINQLQEKGMQLVEENERLRQQVI 172 56789999999999****************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MAREKIQIKK IENATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TDKLFEYASS 60 SMKEILERHN LHSKNLGKME QPSLELQLVE DRNHSTLRKE IAEKSHQLRR LRGEELQGLS 120 IEELQHLESS LEAGLNRVIE KKGEKIKKEI NQLQEKGMQL VEENERLRQQ VIEISNGRKN 180 LTSTDLENII YEEGQSLESV NINCNSTGPP QDDDSSDISL KLGLNIQDST MALHRFTYGC 240 QLGSSIQVAH GLVRKKPERA HGGAGAEPHF EVPGLALASP CGSSARDRAK KQKAASNCHK 300 IKHQLKVAVE AAGDISRLAS TGTLNSLHQA KPIEGGSGLP NSRTRL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-86 | MIKC_MADS family protein |