PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034990.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family AP2
Protein Properties Length: 487aa    MW: 54885.3 Da    PI: 7.6039
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034990.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.6e-17228287155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++gr++A+++d  ++  g  ++ k+++lg ++ +e+Aa+a++ a++k++g
  Oeu034990.1 228 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgKQVYLGGYDMEEKAARAYDLAALKYWG 287
                  78*******************988886678446*************************98 PP
2AP247.15.9e-15330381155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Oeu034990.1 330 SLYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 381
                  57****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MNDDNDNCFG YTKTEASSAV CDSGFHSSFS VMPLKSDGSR CIMKPLSTSH NQVMVPNFTP  60
RLEDFLGGAS HPYGSHETEA MVLSLDSMYY NQEPFKQQIG EEINRVQQYY SAQGIQYHGT  120
YATTNEQQPN KETLAPPMSE TESEMPCLKT WVSLEQQVNP SMVGVGVESL SLSMSPASQS  180
SCVTASRQIS PIETRVFGME SRKRVAEKAA SKPKLHRKSI DNFGQRTSQY RGVTRHRWTG  240
RYEAHLWDNS CKKEGQTRKG KQVYLGGYDM EEKAARAYDL AALKYWGPST HTNFPLENYK  300
NEVVQMENMS RQEFVAHLRR KSSGFSRGIS LYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  360
TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI SRYNVEKIMA TDTLPAREFA RQNKETESYK  420
TVGPEDEECR LVENVGNVTN WKMVENGEAV FFARPTLASN YINPSTNVNS WIPMANLPVF  480
ASWNDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-134AP2 family protein