PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028403.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 337aa    MW: 37683.4 Da    PI: 6.0719
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028403.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.52e-24958150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 k+ien +nrqvtfskRr g++KKA+E+ vLCd++ a+i+fs++g+l  +s
  Oeu028403.1  9 KKIENVTNRQVTFSKRRYGLIKKAYEIAVLCDIDLALIMFSPSGRLSHFS 58
                 68********************************************9997 PP
2K-box16.14.8e-0790172992
        K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 
                  +  +++e+ qqe++ L+ ++e+ q+ +R +  ++    sl e q+ e +L ++l+++ ++K +l ++++e++   ++ +q++n+
  Oeu028403.1  90 APGSNSEEIQQEISDLQHQLESAQELLRVFEPDSERFTSLSEFQSCEARLLEALRRVTQRKRNL-VNKVEQQSSYQDTIQQINT 172
                  566899*************************99999999**********************986.5677777777777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MGRSKLPIKK IENVTNRQVT FSKRRYGLIK KAYEIAVLCD IDLALIMFSP SGRLSHFSGR  60
KRIIQNREYI INTIMKIKTE KDVEIQSPAA PGSNSEEIQQ EISDLQHQLE SAQELLRVFE  120
PDSERFTSLS EFQSCEARLL EALRRVTQRK RNLVNKVEQQ SSYQDTIQQI NTVVQYISEA  180
NPQGVSTSLD DPAIELNYGN HMNTGSDASS AALRDQSSPT MYESVSQTSI NENLQNAEGR  240
QNGNPISGDS FQQMHLSKDF FNALLPPETS DTFEVLFGPI LPFLHSDCSY QASDSKVFPS  300
VVRPLSPLPL SFRDEVASPT GKSIVYGASE ILKKVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.11e-53MIKC_MADS family protein