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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu026071.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 369aa MW: 41175.4 Da PI: 6.9104 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.3 | 3.7e-13 | 65 | 112 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k Oeu026071.2 65 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEIEAARAYDKAAIK 112 89********.7******...5...334336**********99*********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MTQQPQITLR LAYDRAAIKF RGLDADINFS VVDYEKELKQ MKNLTKEEFV HILRRQSTGF 60 SRGSSKYRGV TLHKCGRWEA RMGQLLGKKY IYLGLFDSEI EAARAYDKAA IKCNRREAVT 120 NFDPSTYEEE ISSEAADGNH NLDLNLGIAP PCSASGQNRT IGADGFQIHC TSYSTLPENK 180 EWMHNSAPAT METILSHGHV DVLDHPRFRK GVNSSSCPIY KLKAATDDLP ILYTTKNMLN 240 LDEHLLMLIR AYDKAAIKCN RREAVTNFDP STYEEEISSE AADGNHNLDL NLGIAPPCSA 300 SGQNRTIGAD GFQIHCTSYS TLPENKEWMH NSAPATMETI LSHGHVDVLD HPRFRKGVNS 360 SSCPIYKV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 7e-70 | AP2 family protein |