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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu022008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 353aa MW: 40157 Da PI: 9.9631 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 30 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a+ k++g Oeu022008.1 30 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAAIKYWG 89 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.8 | 7.1e-15 | 134 | 183 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu022008.1 134 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 183 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MENRKRGHEK LKLKPKVHRK AIDSFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR 60 KGRQVYLGGY DMEEKAARAY DLAAIKYWGP TTHVNFPLEN YDNEVVQMEN MSRQEFVAHL 120 RRKSSGFSRG ISMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 180 FRGVNAVTNF EISRYEVEKI MASDTLPARE LARRNKETDP ENKEFHPVER VGNVTNWKMV 240 QNASVESLGD KMMYNAGNYQ NLSFSGALQD LIGIESTNPY TQNFTSPSSL VTGSRETSPD 300 KTGGTVFFVK PNMANNYLNP STNANSWIPT SQLRPVPLAM SDLPVFPSWN DS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-121 | AP2 family protein |