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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu018677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 371aa MW: 42797.2 Da PI: 8.6644 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.5 | 3.9e-14 | 55 | 114 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++++gr++++++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g Oeu018677.1 55 SRFRGVSKHRWTGRYESHLWDkLSWNVtrkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 114 789******************888844444446*************************98 PP | |||||||
2 | AP2 | 49.3 | 1.2e-15 | 150 | 201 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g + + +lg++ t eeAa+a++ a+ +++g Oeu018677.1 150 SKYRGVARHHHNGRWEARIGRvF---G-NHYLYLGTYSTQEEAARAYDIAAIEYRG 201 89****99**********99966...3.5*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MAMTMLMSEE NLGKRFMCME DGEMPEVRRR VKRRKRDTEI VADLKSAPTT VKRSSRFRGV 60 SKHRWTGRYE SHLWDKLSWN VTRKKKGKQV YLGAYDDEEA AARAYDLAAL KYWGRSTFTN 120 FPISDYVEEI EIMQTVTKEE RSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNHYLYLG 180 TYSTQEEAAR AYDIAAIEYR GINAITNFDL NTYIRWLKPE ANTSIPAQEQ KPNPMTHKKM 240 QPSMLQTRGF IADNLIKQER FEQNIPVNTC RKSSSPTAVN LLLRSSMFRE MVQKNSNFMK 300 DEIIDGEDTK NLPQLGGDDE YGGSFCDGPQ DHIPLVLSSD DYSIDLEREL NFNFDYDFPS 360 MSWSNMASLG * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 29 | 37 | RRVKRRKRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-71 | AP2 family protein |