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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu014819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 502aa MW: 56074.8 Da PI: 6.9851 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.1 | 3.2e-16 | 152 | 201 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+ +++a+ k++g Oeu014819.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARVYDRAAIKFRG 201 78*******************......55************************998 PP | |||||||
2 | AP2 | 42.9 | 1.2e-13 | 243 | 293 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g Oeu014819.1 243 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 293 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MWNLNDSPDQ TRADDTDGYT DDKLKGVDSV SNSSSSAVVI EDASEDEVAE RGRKKRSSKI 60 FGFSVAHNDD DRNPCSSECK WLVTRQFFPV DESETGATSS DRPLEFPQAQ RFGVNLSTSE 120 PHGAGGRGFG KSAAEVAQPL KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR VYDRAAIKFR GTEADINFNL EDYEDVKQMS NLTKEEFVHV LRRQSTGFPK 240 GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEVEA ARAYDKAAIK CNGKDAVTNF 300 DASIYDEELR GAESSNNAEY HNLDLSLGNA ASKCSSRELE DENHDQHCST MPFEFDLRLQ 360 GSRSELNFQN GLGQIDRRDG YNENDTLQLL SQTHLHSPGS LKVNELHQYR QFMEGNEPRM 420 LMFSSPVGSQ SYRNQLPSCS NGGGIRGNGE VISISTNDQL WQTKSPQLFA TAAASSGFGQ 480 QILRPQNWLH KSIVRPLTRP S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-116 | AP2 family protein |