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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 454aa MW: 50968.2 Da PI: 6.4012 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Oeu007928.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205 78*******************......55************************997 PP | |||||||
2 | AP2 | 41.3 | 3.8e-13 | 248 | 295 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a++ a+ k Oeu007928.1 248 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDIAAIK 295 89********.7******5553..2.26**********99*********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MWNLNYSPDQ RMDEGERGKR VGSEWNFSSA SLVPVEDGLS EEEEDAERSC GDGNKKRSSK 60 IFGFSVSHDG DDDDDDIGPC SLGSEPPVTR QFFPVDESET TVTSGGGAAP DFPRAHWMGV 120 KFCQSDPNTV GVLGKSAAEV SQPLRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFCLDDYEED LKQMRNLTKE EFVHVLRRQS 240 TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEVEAARAYD IAAIKSNGKE 300 AVTNFDPSIY EELKAPDSSS NASEHNLDLS LGNLASKPSS REFGDNVHHA RDQHSSSLQF 360 ELEWQRRGLM PKHQVSPIDN DLQRRDVFNE TDTTQLLSQT HLYSPGSMKV NEMHRYGQFV 420 KAKEPHMLQM FSPSFSPQNF QFSSSSNGGS IWS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-117 | AP2 family protein |