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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 353aa MW: 39771.6 Da PI: 8.9953 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.1 | 1.4e-10 | 46 | 101 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++g+++A+++d ++n ++k+ + g ++ + Aa a++ a++k++g Oeu006389.1 46 IFRGVTRHRWTGKYEAHLWDkNCWNEaQKKKGRQGAYDDEAAAAHAYDLAALKYWG 101 69******************99999897766677*****99*************98 PP | |||||||
2 | AP2 | 50.1 | 6.9e-16 | 144 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Oeu006389.1 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAVAYDMAAIEYRG 195 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MAKLSQKNQT KTSSKNVAKA ATNPGMKAKR TRKTIPRDSP PQRSSIFRGV TRHRWTGKYE 60 AHLWDKNCWN EAQKKKGRQG AYDDEAAAAH AYDLAALKYW GQDTILNFPL SIYEKELKEM 120 DGRSREEYVG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE 180 EAAVAYDMAA IEYRGINAVT NFDLSRYIKW LKPNNNEPNK SNPIDETNSP PPSNHISSGS 240 ASLDHLQPPL EDVNATFSQP RATIATSALG LLLQSSKFKE MMEMTLAAEY PGTLPESDPP 300 QSSIPEDIKT HFESNDLYAY NIQGDDFFEE LNSFMPSMVQ FDLMLNGDDL IL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-101 | AP2 family protein |