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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | AP2 | ||||||||
Protein Properties | Length: 498aa MW: 56068.6 Da PI: 6.9115 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 154 | 203 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIT21021 154 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 203 78*******************......55************************997 PP | |||||||
2 | AP2 | 42.9 | 1.2e-13 | 246 | 296 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OIT21021 246 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 296 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence |
MWNLNDSPIR RMEDESEEGC SSPIELDEKG KRVGSVSNSS SSALVIEEGN NSEEEEDGEK 60 GKKKRNTPSK IFGFSVDDDN FSSESEPPVT RQFFPVDESE MGGGSMNFPR AQWAGVKFCQ 120 SVPRGNTIAG NPTEVSQQQQ PIKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY 180 LGGFDTAHAA ARAYDRAAIK FRGVEADINF NLEDYEADLK QMTNLTKEEF VHVLRRQSTG 240 FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE VEAARAYDKA AIKCNGKDAV 300 TNFDRSIYEN ELNSTESADN AADHNLDLSL GGSNSKENSR EMGDNRGQNS SSLQLDAHWR 360 HQESRSKLPS PIGFDAQRRD GYNETETLQL LSQTHLNFPG SLQPNINEMQ RIGQFIRDGE 420 SHMVQVFPRQ FNSYQIQSPS SSNVGRIGGT NSQEWYTNNI PPQIFATAAA SSGFPQQIVR 480 PQNWSQNTGF HHNFMRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-131 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21021 |