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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT08632 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | AP2 | ||||||||
Protein Properties | Length: 562aa MW: 63596.1 Da PI: 9.6011 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.5e-19 | 114 | 163 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++y+GVr++k +g+W+AeIrd +++r +lg+f+taeeAa a+++a+ +++ OIT08632 114 KKYRGVRQRK-WGKWAAEIRDaR----RKTRLWLGTFDTAEEAALAYDKAAIEIR 163 59*******9.**********55....35**********************9987 PP | |||||||
2 | AP2 | 59.6 | 7.4e-19 | 481 | 531 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr++k +g+W+AeIrd + kr+r +lg+++ta+eAa a+++a+ +++g+ OIT08632 481 KYRGVRQRK-WGKWAAEIRDTR---KRTRTWLGTYDTAYEAALAYDKAAIEIRGA 531 8*******9.**********42...36*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 562 aa Download sequence |
MTVSRELIQT MASQQEHQKK EAVEKPPEID VVEKSNNQVG ESSGALPHLV RIHVTDRDAT 60 DSSSDEEKAG GEKSEQHGKT CVKEIIIENG KTEVIPKKKS KEKKDITVLQ GDVKKYRGVR 120 QRKWGKWAAE IRDARRKTRL WLGTFDTAEE AALAYDKAAI EIRAMASQEE HQKNEAVEKP 180 SEIDVVEKPS EVDVVEKPSK IDLVEKSINQ VGESSVVLPR VVRIHLPDSS SDDEEKVEGE 240 KSKRHERTCV KEIIIENGKT TVISKKMSRE KKDIKLLQEN AKKRIHVPES DATDSSSDNE 300 EKVEGEKSKR HARMCLNETI IENGKTQVIS KKKSNEKKDV KLLQENAKKR ICVPDCDATD 360 SSSGDEENVE GEKSKRHELT GAKEIVIENG KTEVISKKKS KEKKHKKLLQ ENVKKRIHVL 420 DHDTTDSSSD DEVKAEGKKS QQQEKTCAKE ITFENGKTEV ISKKKSKEKK DIMLLQGNVN 480 KYRGVRQRKW GKWAAEIRDT RKRTRTWLGT YDTAYEAALA YDKAAIEIRG ANALTNIIKP 540 PPRKEINIIF KIPSLPADDA RV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-19 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT08632 |