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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06609 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | AP2 | ||||||||
Protein Properties | Length: 425aa MW: 47423.9 Da PI: 8.6026 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.9e-17 | 71 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g OIT06609 71 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 130 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MASPSSEPTA KPEGSSGNDV GGGETSEAMG SIGTDQLLLY RVLKKAKKER GCTAKERISK 60 MPPCTAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDEEEAAARA 120 YDLAALKYWG PGTLINFPVT DYTRDLEEMQ NVSREDYLAS LRRKSGGFSR GISKYRPLSS 180 RWDLQFGRVP GADYFNSLQY GDDATVNNEY IGGFCMDRKI DLSSYIKWWG GNKARQTDSH 240 LKTSEETKVG CPEDIDNELR ASELSIRQTE PYEMPRLGVC QERKNHKSSA LSAMSILSQS 300 AAYKSLLEKV AKKKEKVEND ENENKSTINR VDRGKTIEKS SPDSGSERLG AAFLNPGGSS 360 ISRNLHPLTP LLSAPLLTNY NNVDPLTDPV LWTSLVPIFH TGSSRTAEVH KSEATSDYTL 420 FQQED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-133 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06609 |