![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT05313 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 370aa MW: 41719.1 Da PI: 7.5519 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.4 | 1.1e-15 | 49 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g OIT05313 49 SIYRGVTRHRWTGRYEAHLWDkNCWNEtqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 108 57*******************999966656446*************************98 PP | |||||||
2 | AP2 | 51.2 | 3.2e-16 | 151 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OIT05313 151 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 202 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 370 aa Download sequence |
MAKTSKCNQK NGTTTSSSSS SNKSNGNAIG KAKRTRKSVP RDSPPQRSSI YRGVTRHRWT 60 GRYEAHLWDK NCWNETQNKK GRQVYLGAYD DEEAAAHAYD LAALKYWGQD TILNFPVLTY 120 EKELKEMEAQ SKEEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL 180 GTYATQEEAA TAYDMAAIEY RGLNAVTNFD LSRYIKWLRP SNQTNNITTI NNPSNSIEPN 240 PSPNADDIHT MPNTKEEMEC SFLRQQQQQS SNSDATTVAL PHPAAGATAS SALGLLLQSS 300 KFKEMLERTS AADCPETPPE PDRPRRSFPD DIQTYFDCQE SSSFIEEHDI IFGDLDSFAS 360 PNMFQCELDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-94 | AP2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT05313 |