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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02547 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | AP2 | ||||||||
Protein Properties | Length: 329aa MW: 37317 Da PI: 9.5311 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.1 | 8.8e-08 | 77 | 110 | 1 | 37 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfg 37 s+++GV+ ++ +grW+A+I + g +k+ +lg++ OIT02547 77 SRFRGVSKHHHNGRWEARIGRvF---G-NKYLYLGTYS 110 789***************99966...3.6*******95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MDLNTSVKSE MASPGKRSIS MVDYDISETT KRVKRRRRSP PAIELNENIG QQGEKQKMDS 60 SKVDQNIAHT PTVKRSSRFR GVSKHHHNGR WEARIGRVFG NKYLYLGTYS KYFHPIILST 120 DQIKTVKTGC QLESCVCFSV GTQEEAARAY DIAAIEYRGI NAVTNFDLST YIRWLKPGAN 180 SQMSFQDIRS ENQAIQMNTN DMINPINDPK FPFSSNYFTT TRETLPPIPQ SQEPIERKMP 240 LSPCNKSSSP TALSLLLRSS MYRELVEKNS TTTASEKDEP NMKNKEQSNT EDGFVFYTSH 300 KLPPLESLEK GTSSRPCDRA GQSFWNAMP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 6e-24 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02547 |