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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96980 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | AP2 | ||||||||
Protein Properties | Length: 524aa MW: 57248.8 Da PI: 5.7332 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48 | 3e-15 | 145 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g OIS96980 145 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 204 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.2 | 5.5e-15 | 247 | 298 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OIS96980 247 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 298 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MDMDSSSENW LGFSLSNINS NNNNNSSINL PSNNASELCL CQSFNSNPNS GVEENGKGAD 60 APPKLEDFLG GSSSITAAAN EVCWENPATT TTTTICEYGS ELKTIAASFL CSFSADQNNS 120 QNKQLAVVAL PPAKKTVETF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQSRKGRQV 180 YLGGYDKEEK AARAYDLAAL KYWGPTTTTN FPVLNYEKEL EEMKSMTRQE FVASLRRKSS 240 GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGLN 300 AVTNFDISRY DVKSIASSNL PVGGMNSKSK TSSESASESS KNVEANRSDD RDRDRDISSA 360 TSAPFSSQAP NMVNLGFGLP IKQDSSDFWS ILGYTNDQNN GSKNPSANAT FFHGPPDGTT 420 IQAQGATLFS MDLPATTTSL NEVNNNQVIF NEEEYYQQQQ SGSCSTITSV PSDISMALNS 480 NATATTTTLD GSNFGNWMPP PLHSFQATAK NNLAPFQTPI FGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-138 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96980 |