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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX97964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 218aa MW: 25050.7 Da PI: 7.5423 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.5 | 1.5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n++ rqvtfskRr+g++KKA+EL +LCda+v ++ifsstgklyey+s RDX97964.1 9 ERIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGLVIFSSTGKLYEYAS 59 69***********************************************86 PP | |||||||
2 | K-box | 70.9 | 3.8e-24 | 84 | 167 | 15 | 98 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++e++ L+++++nLq+++R+l+Ge+L Ls+++Lq Le+qLe sl+ +R kK+++l+++ieel +k + + +en +L kk+ RDX97964.1 84 SEVKREAEILRQQLQNLQENHRQLMGEQLYGLSVRNLQDLENQLEMSLQGVRMKKEQILRDEIEELNRKGNLIYQENVELYKKV 167 57899***************************************************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MGRGKIVIER IDNSTSRQVT FSKRRKGLIK KAKELAILCD AQVGLVIFSS TGKLYEYAST 60 SMKSLIERYA TCKEEHHHLI NPESEVKREA EILRQQLQNL QENHRQLMGE QLYGLSVRNL 120 QDLENQLEMS LQGVRMKKEQ ILRDEIEELN RKGNLIYQEN VELYKKVYGT TDMAITSTNA 180 FVPLPYGMHV GGHPQQLIQL QLCQPEQEVC ETSDTATK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 4e-83 | MIKC_MADS family protein |