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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX95209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | AP2 | ||||||||
Protein Properties | Length: 550aa MW: 60201.6 Da PI: 7.3065 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.4 | 2.8e-11 | 357 | 413 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf.....gtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g RDX95209.1 357 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFvhmvtATEEEAAEAYDIAAIKFRG 413 57****************988633...59999999966666688**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MARANNWLSF SLSPMEMLRT SEPQFVQYDA ASATSSHHYF LDNLYTNGWG NGNPKSHVMF 60 EQNLNRSDVS FVESSQTVSH APPPKLEDFL GDSSAVMRYS DSQTETQDSS LTHMYDHHGS 120 AYFGDQQDLK AIAGFQAFST NSGSEVDDSA SIGKAQPTEF GTHSIESSGN EFAAFSGAGS 180 AATGTLSLAV AQSSEKAVVA ADSGSSKKIV DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 240 CRREGQARKG RQGKAAFDHI THHSPILKFV LAYIEVVERP LLPPESKLSW LSGGYDKEEK 300 AARAYDLAAL KYWGPTATTN FPVSNYTKEV EEMKHVTKQE FIASLRRKSS GFSRGASIYR 360 GVTRHHQQGR WQARIGRVAG NKDLYLGTFV HMVTATEEEA AEAYDIAAIK FRGANAVTNF 420 EMNRYDVEAI MKSSLPVGGA AKRLKLSLES EQKGPVSSSS SQQNPQCANV SGNINFSAIH 480 HQPIASIPCG IPFDSTAAYY HHNLFQHFHP TNNAGTTASA VNVTSANATG LTALPPPAPA 540 DFFIWPHQSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.3 | 1e-172 | AP2 family protein |