PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX90868.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family AP2
Protein Properties Length: 654aa    MW: 72900.7 Da    PI: 6.7618
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX90868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.46.3e-12241297155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++ +e+Aaka++ a++k++g
  RDX90868.1 241 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAAKAYDLAALKYWG 297
                 78*******************433.44555535555.779999**************98 PP

2AP247.83.5e-15430481155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  RDX90868.1 430 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 481
                 78****************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MSNWLGFSLT PHLRIDEEFE RENQEREGGY PPSHPHLSVM PLRSDGSLCV ADSFTHSAAP  60
QEWRYDNAIG GGNSNEEGPK LEDFLGCYSN SPMAESKVFC QDSQHDQNQG QNNVSKINVN  120
VAPSFCTNAE IETGESLTNP SSLLQSFHAY NDNSHALIPT NGMYKSWLAQ TQFSEGKPSA  180
EANGCNFNSL SLTMSSSVQN GVGAISSVQV SEDNRKRIMA KSHSREPVPR KSIDTFGQRT  240
SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQGGYDK EEKAAKAYDL AALKYWGPTT  300
HINFPVRFLK TCTLFSFAKV LPLLLVLQQY KIEARELNYL EKSNISYVFN LCGFNHYIVT  360
VITLHVYRFL NAQLSTYEKE LEEMKHMTRQ EFVANLRSKF SLSPSYSTWK ESSFLFPSAR  420
KSSGFSRGAS VYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR  480
GTSAVTNFDI SRYDVKRICS SSTLIAGDLA KRSPKELVPA TAATDDFNSS GSSMPAQPPP  540
MAITDGEHSD ELSNMMWNAN SDEQAQNESA NMNNGTESSQ QVSPSNKDAL NPQSPKCSVN  600
EFGVGGSADY GHGYFTLDGP KFDDGNNESD HMNTNRLGNL GLVNQVPMFA LWNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.12e-93AP2 family protein