PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX86895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family AP2
Protein Properties Length: 574aa    MW: 63495.9 Da    PI: 6.6816
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX86895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-11192248155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  RDX86895.1 192 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 248
                 57*******************5444.2455536655.779999**************98 PP

2AP2476.3e-15293342355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  RDX86895.1 293 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 342
                 9***************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MVCWKPVEES ESTKMTLPKG VKQANKGSIM NNNWLSFPLS PTHSSLPTHD LQATQYHQFS  60
LGLVNENMEN PFQNHDWNLI NTHSSNEVPK VADFLGVSKS ENQSDLAALN EIQSNDSDYL  120
FTNNSLVPMQ NPVVDTPSNE YQENANSNLQ SLTLSMGSGK DSTCETSGEN STNTVEAAAP  180
RRTLDTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQGGYD KEEKAARAYD  240
LAALKYWGTS TTTNFPISNY EKELDEMKHM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH  300
QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVKAIL  360
ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSSTFQY GTSSSSRLHA YPLMQQHQFE  420
QPQPLLTLQN HDIGSHFSHQ DPSSLHQGYI QTQLQLHQQS GASSYLQNNA QFYNGYLQNH  480
PALLQGMMNM GSSSSSSSVL ENNNNNHSNV AGFVGSGFGM ASNASSSNAV GTAEELGLVK  540
VDYDMPAGGY GGWSAAAAES MQTSNAGVFT MWND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.10.0AP2 family protein