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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX86895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | AP2 | ||||||||
Protein Properties | Length: 574aa MW: 63495.9 Da PI: 6.6816 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 192 | 248 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g RDX86895.1 192 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 248 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47 | 6.3e-15 | 293 | 342 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g RDX86895.1 293 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 342 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 574 aa Download sequence |
MVCWKPVEES ESTKMTLPKG VKQANKGSIM NNNWLSFPLS PTHSSLPTHD LQATQYHQFS 60 LGLVNENMEN PFQNHDWNLI NTHSSNEVPK VADFLGVSKS ENQSDLAALN EIQSNDSDYL 120 FTNNSLVPMQ NPVVDTPSNE YQENANSNLQ SLTLSMGSGK DSTCETSGEN STNTVEAAAP 180 RRTLDTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQGGYD KEEKAARAYD 240 LAALKYWGTS TTTNFPISNY EKELDEMKHM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH 300 QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVKAIL 360 ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSSTFQY GTSSSSRLHA YPLMQQHQFE 420 QPQPLLTLQN HDIGSHFSHQ DPSSLHQGYI QTQLQLHQQS GASSYLQNNA QFYNGYLQNH 480 PALLQGMMNM GSSSSSSSVL ENNNNNHSNV AGFVGSGFGM ASNASSSNAV GTAEELGLVK 540 VDYDMPAGGY GGWSAAAAES MQTSNAGVFT MWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20840.1 | 0.0 | AP2 family protein |