PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX71154.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 306aa    MW: 35504.5 Da    PI: 9.7426
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX71154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.59.7e-3085135151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 k ien +nrqvt+skRrngi+KKA+ELSvLCda+v++i+fs+++k++ey+s
  RDX71154.1  85 KLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYIS 135
                 569**********************************************86 PP

2K-box67.73.8e-23152248699
       K-box   6 gks.leeakaeslqqelakLkkeienLqreqRhllGedL..esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 g   l+ +++e++ ++l+kLk+ +++L+r++Rh++Ge+L  ++Ls+++L+ Le+++ +s+ kiR++K +++++ +++ +kk k+l++ n +L  +l+
  RDX71154.1 152 GDIdLWRSHYEKMLENLKKLKDINNKLRRQIRHRIGEGLelDDLSFQQLRTLEEDMVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNGNLLLELK 248
                 33359********************************752279************************************************988876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
YTPSLLFLWQ LSLPIWERLF TSLHLFLFCV YEFLFTALPL ALLPPSLSPL LILVLGKGSK  60
RRSTQVVARF VVIDLEMGRG KIEIKLIENP TNRQVTYSKR RNGIFKKAHE LSVLCDAKVS  120
LIMFSKNNKM HEYISPGLST KKIIDQYQKT LGDIDLWRSH YEKMLENLKK LKDINNKLRR  180
QIRHRIGEGL ELDDLSFQQL RTLEEDMVSS IGKIRERKFH VIKTRTDTCR KKVKSLEQMN  240
GNLLLELKEK CVIHPQFLLH DEGDEESAVA LANGASTLYA FCQHHTHLNL PQHGEEPFKT  300
DDLRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-61MIKC_MADS family protein