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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX62358.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 326aa MW: 38103.1 Da PI: 10.057 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.1 | 7.1e-31 | 99 | 149 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+ey++ RDX62358.1 99 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYAT 149 79***********************************************86 PP | |||||||
2 | K-box | 108.3 | 8.8e-36 | 165 | 264 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 y++++ ++++++ + +++ e+++Lk++i+ Lqr++Rh++GedL+s+slkeLq+LeqqL+++lk+iR+++n+l++e+i+elqkkek +qe+n++L kk++ RDX62358.1 165 YAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSMSLKELQSLEQQLDTALKQIRTRRNQLMYESISELQKKEKVIQEQNNMLAKKIK 263 566777888889999**********************************************************************************98 PP K-box 100 e 100 e RDX62358.1 264 E 264 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
QHSTLALTVL SHDTTLYLSR RRKIHELTFP RSLRLICQPF NLTSWLIFFF FPCLGFGVFF 60 VKKGRTNCLS HYLGIIYNIF KTQKKKKTTK MGRGRVQLKR IENKINRQVT FSKRRAGLLK 120 KAHEISVLCD AEVALIVFSH KGKLFEYATD SCMEKILERY ERYAYAERQL VANDSESQGN 180 WTIEYTRLKA KIDLLQRNHR HYMGEDLGSM SLKELQSLEQ QLDTALKQIR TRRNQLMYES 240 ISELQKKEKV IQEQNNMLAK KIKEKEKVAA QQAQWEHPNH GVNASFLLPQ PLLNMGGNYR 300 EEAPEVGRNE LDLTLEPLYS CHLGCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-105 | MIKC_MADS family protein |