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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA20390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 26452.8 Da PI: 9.4441 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.2 | 1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRr+gi+KKA EL vLCdaev++i+fsstgk+ ey+s OVA20390.1 9 KRIENATNRQVTYSKRRAGIMKKARELTVLCDAEVSLIMFSSTGKFSEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 95.6 | 7.9e-32 | 74 | 172 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 yq+++g +l+++++es+q++l+kLk+ ++ L+re+R+++GedLe+L++ eL+ Leq+Le+slk +R++K+++l++q+++ +kk +++ e+n++L +++e OVA20390.1 74 YQQATGINLWNSHYESMQNNLNKLKEINNRLRREIRQRMGEDLEDLTMVELRGLEQNLESSLKVVRERKYHVLTTQTDTYKKKIRSHTETNHNLLREFE 172 7899999***************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MGRGKIEIKR IENATNRQVT YSKRRAGIMK KARELTVLCD AEVSLIMFSS TGKFSEYISP 60 SSSLNPTKRI FDRYQQATGI NLWNSHYESM QNNLNKLKEI NNRLRREIRQ RMGEDLEDLT 120 MVELRGLEQN LESSLKVVRE RKYHVLTTQT DTYKKKIRSH TETNHNLLRE FEGGDHVDPH 180 YALANNQEGD YEAALELANG GPNIFAFRLQ PSQPNLHDGG GYGSHDLRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 2e-65 | MIKC_MADS family protein |