PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19000.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 526aa MW: 58356.4 Da PI: 6.8473

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.7	4.3e-11	176	232	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g OVA19000.1 176 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 232 57*****************5444.2455535555.7799999***********98 PP
2	AP2	47.2	5.5e-15	275	326	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OVA19000.1 275 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 326 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MDSSQNWLAF SLSNPPHDHH HHYQQTSSDH HYFETFNTTS SHSREDDNNG TTTVGGTEGG 60 CSGADLSMFN FGPKLEDFLG VCGTTTTSTT SPLCQFSGEN NHQSDHTTGI YDDSELKSIA 120 ASFLRGYSTM TDHHNIPTTT THDHTENLNA AAAVVAPVVT SPVSKKAVDN FGQRTSIYRG 180 VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ GGYDKEDKAA RAYDLAALKY WGPTTTTNFP 240 VTNYEKEIEE MKNMSRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK 300 DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSIANSNLPI GGITGKTRAN 360 SESISDNRSN DGSRSDDRDF SSISSTTLSF GIPIKQDPSD HYWSSLVESQ NNNSATTNAF 420 LQHHQPASLL TNGSAMELSS STRSYDPNHQ SNMNMFFNGG FVHHQQEQEQ QQQCTSSIPF 480 GSNNNNMMSY SSNPSYGSWV TPSPAHVFQT GKPNLSVFQT PIFGME

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MDSSQNWLAF SLSNPPHDHH HHYQQTSSDH HYFETFNTTS SHSREDDNNG TTTVGGTEGG  60
CSGADLSMFN FGPKLEDFLG VCGTTTTSTT SPLCQFSGEN NHQSDHTTGI YDDSELKSIA  120
ASFLRGYSTM TDHHNIPTTT THDHTENLNA AAAVVAPVVT SPVSKKAVDN FGQRTSIYRG  180
VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ GGYDKEDKAA RAYDLAALKY WGPTTTTNFP  240
VTNYEKEIEE MKNMSRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK  300
DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSIANSNLPI GGITGKTRAN  360
SESISDNRSN DGSRSDDRDF SSISSTTLSF GIPIKQDPSD HYWSSLVESQ NNNSATTNAF  420
LQHHQPASLL TNGSAMELSS STRSYDPNHQ SNMNMFFNGG FVHHQQEQEQ QQQCTSSIPF  480
GSNNNNMMSY SSNPSYGSWV TPSPAHVFQT GKPNLSVFQT PIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-141	AP2 family protein