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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA18183.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 507aa MW: 55718 Da PI: 7.3066 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.2 | 4.2e-13 | 276 | 326 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g OVA18183.1 276 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEIEAARAYDKAAIKCNG 326 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence |
MLDLNIAVSE DSTTCDEEEI MMVKVRESSG RGQVDDSGTS NSSVVNAEAA ASSNGGEEDS 60 CSTHTKRTRS DDLLVFNFDI LKKKDVGSKI TAAVEDDVEG NLTLFQSSFV TKQLFPVSDG 120 DGSGGFNLVF PSLDSSSSRS HWIDLSSRHV IGGGKPEVKV VQQQQPQQQQ QQPKKSRRGP 180 RSRSSQYRGV TFYRRTGRWE SHIWLVLSVL IEFLSFGFSD FRAYDRAAIK FRGVEADINF 240 NLSDYDEDLK QMTNLTKEEF VHILRRHSTG FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK 300 YIYLGLFDNE IEAARAYDKA AIKCNGREAV TNFEPSTYAG EIIPKIHNGG TNDELDLNLG 360 ISTPSLADGR CVSNGVAGFQ FSYSPFGIHD AKRARTDNPA SATQRVQPLN GRAMASEYPP 420 FWIGISPSLF PNYEERTTAR KVEVGLPVLA NGSSQTNGSN VPTTTMPLLS AAASSGFSSS 480 ATIASSAAFP PPHPPNINTT SDYYRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 2e-85 | AP2 family protein |